Chapter 1. Chapter 7 Branched Tutorial: Gene Mapping

1.1 Problem Statement

Final Feedback: Solution Strategy and Tips…

1. To work this problem correctly, you must first understand the relationship between genotype and phenotype for the genes shown. When deletion mutations are not present in the region of interest, the fly is heterozygous and the wild-type phenotype is observed.

2. When a deletion mutation occurs in the region of interest, the gene(s) at that locus is/are disrupted and the corresponding protein is either not expressed or is nonfunctional. In absence of the expression of the protein at the deleted locus, the recessive phenotype associated with the allele on the homologous chromosome is expressed.

3. If you compile the expression data for multiple overlapping deletions, you can determine the relative order of the genes within that region of the chromosome. Making a diagram and compiling the accompanying table will help you compile the data needed to solve the problem.

The locations of six deletions have been mapped to the Drosophila chromosome as shown in the diagram below. Recessive mutations (“a”, “b”, “c”, “d”, “e”, “f”, and “g”) found in seven genes are known to be located in the same region as the deletions, but the order of the mutations (or genes) on the chromosome is not known. The phenotypes observed in heterozygous offspring when flies homozygous for recessive mutations are crossed with flies homozygous for deletion mutations are summarized in the accompanying table. The symbol “m” represents a mutant phenotype and a plus sign (+) represents the wild type phenotype. On the basis of this data, determine the relative order of the seven mutant genes on the chromosome. You can find additional information about deletion mapping by referring to page 194 of your textbook.

Directions: Position genes “a”-“g” in the correct order along the chromosome by choosing the appropriate gene designation at the positions indicated by the numbered boxes. Lines associated with a specific deletion indicate the region of the chromosome that is missing.

Question

1. eJS8FM0cAq4DJnNyfYnfOeDqnNujeto5+t3Lpg== 2. h0Xt5tqVQvdQefDxjeXJgkIUn79dbrv6Cf57hA== 3. wR7Zyb30FVDpDcAwOt9bY4ceum4jGXcK86g+cA== 4. Z47pDkYIXwP6FcCUs9oaCW17JsakctMGtcXlkw== 5. OHsiPp8CbaPS18r8KeN8cncdJhxBmN9THquVKg== 6. yFSA/BtuY4UFjkCfTKJ5dXdeGvJa3gjBivblsw== 7. 7BXN6aJ+YOKpmduuNsXMES7EecyHgsRbfx3+kw==
2
Congratulations! You have correctly worked the problem.
At least one of your answers is incorrect. Please try again.
Incorrect. Let’s work through the problem step-by-step.
false
{qq == true} done
{help} 1.2 OK. Let’s work through the problem step-by-step.
{else} 1.2 Let’s work through the problem step-by-step.

1.2 Step 1: Understand the problem and what you need to know.

Question

1. Select the correct responses to the following questions to show that you recognize the information provided to you in the problem.

Answer Options:
1. Recessive.
2. Relative order on the chromosome is unknown.
3. Relative order on the chromosome is shown in the diagram.
4. One is homozygous for recessive alleles “a”-“g” and the other is homozygous for deletion mutations 1-6.
5. A “+” in the table designates the wild-type phenotype and an “m” designates the mutant (recessive) phenotype.
6. The recessive allele is located on one chromosome and either a deletion or wild-type sequence with one or more flanking deletions is located at the same locus on the homologue.

Gqn32MvulWFOryW4swTMtO7fo5xtzV+D What is known about the relative order of the deletion mutations?

+6UyY5QzBbqZe8GNczxNLJp2aCQwX9BQ What is known about the relative order of genes “a”-“g”?

WlfQdaroW+nxAM55phBA4sL/quCZjRNf What is the pattern of inheritance for the alleles of genes “a”-“g”?

/8WJug86Ti2b1qib83Ww/fce+O5t6FLu What are the genotypes of the parental flies whose mating is described in the problem statement?

HWPY2fFETaamnq3nDoe/UG9X+sRI0QD8 What are the genotypes of the progeny produced by the mating described in the problem statement?

2T0De9w42+4V56eryxkTPdlVq+nHvLha How are the phenotypes of the progeny represented in the provided table?

2
Correct.
You have provided at least one incorrect answer. Try again.
Incorrect.

Instant TA

Review the information provided in the Problem Statement and accompanying Figure and Table. The answers to these six questions are provided for you in the Problem Statement. This information is required for you to answer the problem correctly.

Instructions

Read the problem carefully and note the following:

    •What information is provided for you?
    •What information are you asked to provide?

Now, let’s answer 3 questions to be certain that you understand the problem. The Instant TA will be available on-demand to assist you and as a resource if you answer a question incorrectly.

Question

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
2
Correct.
Incorrect.

Instant TA

Review the information provided in the Problem Statement and accompanying Figure and Table. The answers to the six questions are provided for you in the Problem Statement. This information is required for you to answer the problem correctly.

Question

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
2
Correct.
Incorrect.

Instant TA

Since each parent is homozygous, only one combination of alleles is possible in the gametes of each parent. The offspring of this mating will be heterozygous at the chromosomal region under consideration in this problem. If the two homologous chromosomes are examined, one will contain the recessive alleles for seven genes, while the other chromosome will contain one of the deletion mutations. Adjacent sequences to the deletion are assumed to contain wild-type alleles of any remaining genes.

What phenotype would be observed if the gene under consideration falls within the deleted region in the homologue?

What phenotype would be observed if the gene falls within the sequences flanking the deletion?

1.3 Step 2: Determine which deletions allow expression of the mutant recessive phenotype associated with the mutant genes.

Question

1. Which deletion(s) allow the expression of the recessive phenotype associated with mutant gene “a”? Please select the position of “a” from the dropdown menu below.

Position of “a”: jJcY0Py6nXIyXXNv142RtXmyjGSucP30bhuOIQ==

2
Correct. The recessive phenotype associated with gene “a” is expressed in flies with deletions 4, 5, and 6, but not in flies with the other deletions. This expression pattern indicates that gene “a” is located in regions unique to deletions 4, 5, and 6, as shown by the dotted box included in the figure in the next question.
Incorrect. Please consult the Instant TA for guidance and try again.
Incorrect. What phenotype would be expressed if the deletion mutation is located at the gap shown in the diagram below?

Instant TA

The relative order of genes “a”-“g” can be mapped by examining the expression of recessive alleles in flies with different deletion mutations. Consider the diagram below, where the gap identifies the position of a deletion:

  • If gene “a” is not located in the region deleted in the homologous chromosome, the wild-type phenotype will be observed.
  • If gene “a” is located within a region deleted in the homologous chromosome, then the recessive phenotype will be observed.

Question

2. Which deletion(s) allow the expression of the recessive phenotype associated with mutant gene “b”? Please select the position of “b” from the dropdown menu below.

Position of “b”: gPxqWBZsD1mgfhO9zdki8qR2B8vSqC5Sbibk5A==

2
Correct. The mutant phenotype associated with gene “b” is only expressed in heterozygous flies with deletion 1, but not in flies with the other deletions. This expression pattern indicates that gene “b” is located in regions unique to deletion 1, as shown by the dotted box included in the figure in the next question.
Incorrect. Please consult the Instant TA for guidance and try again.
Incorrect. What phenotype would be expressed if the deletion mutation is located at the gap shown in the diagram below?

Instant TA

The relative order of genes “a”-“g” can be mapped by examining the expression of recessive alleles in flies with different deletion mutations. Consider the diagram below, where the gap identifies the position of a deletion:

  • If gene “b” is not located in the region deleted in the homologous chromosome, the wild-type phenotype will be observed.
  • If gene “b” is located within a region deleted in the homologous chromosome, then the recessive phenotype will be observed.

Question

3. Which deletion(s) allow the expression of the recessive phenotype associated with mutant gene “c”? Please select the position of “c” from the dropdown menu below.

Position of “c”: cqw806jPMGwpc4m+OLdiVJkSS5TqIkjeS5nlOA==

2
Correct. The mutant phenotype associated with gene “c” is only expressed in heterozygous flies with deletion 1 and 2, but not in flies with the other deletions. This expression pattern indicates that gene “c” is located in the regions unique to deletions 1 and 2, as shown by the dotted box included in the figure in the next question.
Incorrect. Please consult the Instant TA for guidance and try again.
Incorrect. What phenotype would be expressed if the deletion mutation is located at the gap shown in the diagram below?

Instant TA

The relative order of genes “a”-“g” can be mapped by examining the expression of recessive alleles in flies with different deletion mutations. Consider the diagram below, where the gap identifies the position of a deletion:

  • If gene “c” is not located in the region deleted in the homologous chromosome, the wild-type phenotype will be observed.
  • If gene “c” is located within a region deleted in the homologous chromosome, then the recessive phenotype will be observed.

Question

4. Which deletion(s) allow the expression of the recessive phenotype associated with mutant gene “d”? Please select the position of “d” from the dropdown menu below.

Position of “d”: Rtbmprx56JE7ysAtl8H6BbWpEOZBULAtSI6e6A==

2
Correct. The mutant phenotype associated with gene “d” is only expressed in heterozygous flies with deletion 1-4 and deletion 6, but not in flies with deletion 5. This expression pattern indicates that gene “d” is located in the regions unique to deletions 1-4 and deletion 6 as shown by the dotted box included in the figure below.
Incorrect. Please consult the Instant TA for guidance and try again.
Incorrect. What phenotype would be expressed if the deletion mutation is located at the gap shown in the diagram below?

Instant TA

The relative order of genes “a”-“g” can be mapped by examining the expression of recessive alleles in flies with different deletion mutations. Consider the diagram below, where the gap identifies the position of a deletion:

  • If gene “d” is not located in the region deleted in the homologous chromosome, the wild-type phenotype will be observed.
  • If gene “d” is located within a region deleted in the homologous chromosome, then the recessive phenotype will be observed.

Question

5. Which deletion(s) allow the expression of the recessive phenotype associated with mutant gene “e”? Please select the position of “e” from the dropdown menu below.

Position of “e”: F29p0rbolsmo9ZzyE8Uq5p2TUjF3rNdqB2UiQg==

2
Correct. The recessive phenotype associated with gene “e” is expressed in flies with deletions 4, 5, and 6, but not in flies with the other deletions. This expression pattern indicates that gene “e” is located in regions unique to deletions 4, 5, and 6, as shown by the dotted box included in the figure in the next question.
Incorrect. Please consult the Instant TA for guidance and try again.
Incorrect. What phenotype would be expressed if the deletion mutation is located at the gap shown in the diagram below?

Instant TA

The relative order of genes “a”-“g” can be mapped by examining the expression of recessive alleles in flies with different deletion mutations. Consider the diagram below, where the gap identifies the position of a deletion:

  • If gene “e” is not located in the region deleted in the homologous chromosome, the wild-type phenotype will be observed.
  • If gene “e” is located within a region deleted in the homologous chromosome, then the recessive phenotype will be observed.

Question

6. Which deletion(s) allow the expression of the recessive phenotype associated with mutant gene “f”? Please select the position of “f” from the dropdown menu below.

Position of “f”: +Vf1AQF07tU0hnDTCddRIA1HnnnWGpOKtV7PEg==

2
Correct. The recessive phenotype associated with gene “f” is expressed in flies with deletions 4, 5, and 6, but not in flies with the other deletions. This expression pattern indicates that gene “f” is located in regions unique to deletions 4, 5, and 6, as shown by the dotted box included in the figure in the next question.
Incorrect. Please consult the Instant TA for guidance and try again.
Incorrect. What phenotype would be expressed if the deletion mutation is located at the gap shown in the diagram below?

Instant TA

The relative order of genes “a”-“g” can be mapped by examining the expression of recessive alleles in flies with different deletion mutations. Consider the diagram below, where the gap identifies the position of a deletion:

  • If gene “f” is not located in the region deleted in the homologous chromosome, the wild-type phenotype will be observed.
  • If gene “f” is located within a region deleted in the homologous chromosome, then the recessive phenotype will be observed.

Question

7. Which deletion(s) allow the expression of the recessive phenotype associated with mutant gene “g”? Please select the position of “g” from the dropdown menu below.

Position of “g”: Lj0uwI2XHcEd8THQs4ZKkO8ZHZyRp3c6S/Eg8g==

2
Congratulations! You have placed the seven genes in order along the chromosome. After mapping each of the mutations, the relative order of the seven genes is b, c, d, e, a, f, and g. The relative gene order and the correspondence of each gene to the deleted regions is shown on the figure below.
Incorrect. Please consult the Instant TA for guidance and try again.
Incorrect. What phenotype would be expressed if the deletion mutation is located at the gap shown in the diagram below?

Instant TA

The relative order of genes “a”-“g” can be mapped by examining the expression of recessive alleles in flies with different deletion mutations. Consider the diagram below, where the gap identifies the position of a deletion:

  • If gene “g” is not located in the region deleted in the homologous chromosome, the wild-type phenotype will be observed.
  • If gene “g” is located within a region deleted in the homologous chromosome, then the recessive phenotype will be observed.