3.6 Proteomics

For most of the twentieth century, the study of proteins was restricted primarily to the analysis of individual proteins. For example, one would study an enzyme by determining its enzymatic activity (its substrates, products, rate of reaction, requirement for cofactors, pH, etc.), its structure, and its mechanism of action. In some cases, the relationships between a few enzymes that participate in a metabolic pathway might also be studied. On a broader scale, the localization and activity of an enzyme would be examined in the context of a cell or tissue. The effects of mutations, diseases, or drugs on the expression and activity of the enzyme might also be the subject of investigation. This multipronged approach provided deep insight into the function and mechanisms of action of individual proteins or relatively small numbers of interacting proteins. However, such a one-by-one approach to studying proteins does not readily provide a global picture of what is happening in the proteome of a cell, tissue, or entire organism.