Section 25.1
How would you respond to someone who said that models are useless in studying population genetics because they represent oversimplifications of the real world?
Voles (Microtus ochrogaster) were trapped in fields in southern Indiana and genotyped for a transferrin locus. The following numbers of genotypes were recorded, where TE and TF represent different alleles.
TETE | TETF | TFTF |
407 | 170 | 17 |
Calculate the genotypic and allelic frequencies of the transferrin locus for this population.
Jean Manning, Charles Kerfoot, and Edward Berger studied genotypic frequencies at the phosphoglucose isomerase (GPI) locus in the cladoceran Bosmina longirostris (a small crustacean known as a water flea). At one location, they collected 176 of the animals from Union Bay in Seattle, Washington, and determined their GPI genotypes by using electrophoresis (J. Manning, W. C. Kerfoot, and E. M. Berger. 1978. Evolution 32:365-374).
Genotype | Number |
---|---|
S1S1 | 4 |
S1S2 | 38 |
S2S2 | 134 |
Determine the genotypic and allelic frequencies for this population.
Orange coat color of cats is due to an X-linked allele (XO) that is codominant with the allele for black (X+). Genotypes of the orange locus of cats in Minneapolis and St. Paul, Minnesota, were determined, and the following data were obtained:
XOXO females | 11 |
XOX+ females | 70 |
X+X+ females | 94 |
XOY males | 36 |
X+Y males | 112 |
Calculate the frequencies of the Xo and X+ alleles for this population.
Section 25.2
Use the graph shown in Figure 25.3 to determine which genotype is most frequent when the frequency of the A allele is:
A total of 6129 North American Caucasians were blood typed for the MN locus, which is determined by two codominant alleles, LM and LN. The following data were obtained:
Blood type | Number |
---|---|
M | 1787 |
MN | 3039 |
N | 1303 |
Carry out a chi-square test to determine whether this population is in Hardy–Weinberg equilibrium at the MN locus.
Assume that the phenotypes of lady beetles shown in Figure 25.1 are encoded by the following genotypes:
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Phenotype | Genotype |
---|---|
All black | BB |
Some black spots | Bb |
No black spots | bb |
Most black bears (Ursus americanus) are black or brown in color. However, occasional white bears of this species appear in some populations along the coast of British Columbia. Kermit Ritland and his colleagues determined that white coat color in these bears results from a recessive mutation (G) caused by a single nucleotide replacement in which guanine substitutes for adenine at the melanocortin-1 receptor locus (mcr1), the same locus responsible for red hair in humans (K. Ritland, C. Newton, and H. D. Marshall. 2001. Current Biology 11:1468–1472). The wild-type allele at this locus (A) encodes black or brown color. Ritland and his colleagues collected samples from bears on three islands and determined their genotypes at the mcr1 locus.
Genotype | Number |
---|---|
AA | 42 |
AG | 24 |
GG | 21 |
Genotypes of leopard frogs from a population in central Kansas were determined for a locus (M) that encodes the enzyme malate dehydrogenase. The following numbers of genotypes were observed:
Genotype | Number |
---|---|
M1M1 | 20 |
M1M2 | 45 |
M2M2 | 42 |
M1M3 | 4 |
M2M3 | 8 |
M3M3 | 6 |
Total | 125 |
Full color (D) in domestic cats is dominant over dilute color (d). Of 325 cats observed, 194 have full color and 131 have dilute color.
Tay–Sachs disease is an autosomal recessive disorder. Among Ashkenazi Jews, the frequency of Tay–Sachs disease is 1 in 3600. If the Ashkenazi population is mating randomly for the Tay–Sachs gene, what proportion of the population consists of heterozygous carriers of the Tay–Sachs allele?
In the plant Lotus corniculatus, cyanogenic glycoside protects the plant against insect pests and even grazing by cattle. This glycoside is due to a simple dominant allele. A population of L. corniculatus consists of 77 plants that possess cyanogenic glycoside and 56 that lack the compound. What is the frequency of the dominant allele responsible for the presence of cyanogenic glycoside in this population?
Color blindness in humans is an X-linked recessive trait. Approximately 10% of the men in a particular population are color blind.
Section 25.3
The human MN blood type is determined by two codominant alleles, LM and LN. The frequency of LM in Eskimos on a small Arctic island is 0.80.
Demonstrate mathematically that full-sib mating (F = ) reduces the heterozygosity by with each generation.
Section 25.4
The forward mutation rate for piebald spotting in guinea pigs is 8 × 10−5; the reverse mutation rate is 2 × 10−6.
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If no other evolutionary forces are assumed to be present, what is the expected frequency of the allele for piebald spotting in a population that is in mutational equilibrium?
For three years, Gunther Schlager and Margaret Dickie estimated the forward and reverse mutation rates for five loci in mice that encode various aspects of coat color by examining more than 5 million mice for spontaneous mutations (G. Schlager and M. M. Dickie. 1966. Science 151:205-206). The numbers of mutations detected at the dilute locus are as follows:
Number of gametes examined | Number of mutations detected | |
---|---|---|
Forward mutations | 260,675 | 5 |
Reverse mutations | 583,360 | 2 |
Calculate the forward and reverse mutation rates at this locus. If these mutations rates are representative of rates in natural populations of mice, what would the expected equilibrium frequency of dilute mutations be?
In Figure 25.10, each blue dot represents one copy of the A allele and each red dot represents each copy of the a allele. Calculate the frequencies of the A allele in population II before and after migration. Explain why the frequency of A in population II changed after migration.
In German cockroaches, curved wing (cv) is recessive to normal wing (cv+). Bill, who is raising cockroaches in his dorm room, finds that the frequency of the gene for curved wings in his cockroach population is 0.6. In his friend Joe’s apartment, the frequency of the gene for curved wings is 0.2. One day Joe visits Bill in his dorm room, and several cockroaches jump out of Joe’s hair and join the population in Bill’s room. Bill estimates that, now, 10% of the cockroaches in his dorm room are individual roaches that jumped out of Joe’s hair. What is the new frequency of curved wings among cockroaches in Bill’s room?
A population of water snakes is found on an island in Lake Erie. Some of the snakes are banded and some are unbanded; banding is caused by an autosomal allele that is recessive to an allele for no bands. The frequency of banded snakes on the island is 0.4, whereas the frequency of banded snakes on the mainland is 0.81. One summer, a large number of snakes migrate from the mainland to the island. After this migration, 20% of the island population consists of snakes that came from the mainland.
Pikas are small mammals that live at high elevation in the talus slopes of mountains. Most populations located on mountain tops in Colorado and Montana in North America are isolated from one another: the pikas don’t occupy the low-elevation habitats that separate the mountain tops and don’t venture far from the talus slopes. Thus, there is little gene flow between populations. Furthermore, each population is small in size and was founded by a small number of pikas.
A group of population geneticists propose to study the amount of genetic variation in a series of pika populations and to compare the allelic frequencies in different populations. On the basis of the biology and distribution of pikas, predict what the population geneticists will find concerning the within- and between-population genetic variation.
What proportion of the populations shown in Figure 25.13 reached fixation by generations 10, 25, and 30? How does the proportion of populations that reach fixation due to genetic drift change over time?
In a large, randomly mating population, the frequency of the allele (s) for sickle-cell hemoglobin is 0.028. The results of studies have shown that people with the following genotypes at the beta-chain locus produce the average numbers of offspring given:
Genotype | Average number of offspring produced |
---|---|
SS | 5 |
Ss | 6 |
ss | 0 |
Two chromosomal inversions are commonly found in populations of Drosophila pseudoobscura: Standard (ST) and Arrowhead (AR). When treated with the insecticide DDT, the genotypes for these inversions exhibit overdominance, with the following fitnesses:
Genotype | Fitness |
---|---|
ST/ST | 0.47 |
ST/AR | 1 |
AR/AR | 0.62 |
What will the frequencies of ST and AR be after equilibrium has been reached?
In a large, randomly mating population, the frequency of an autosomal recessive lethal allele is 0.20. What will the frequency of this allele be in the next generation if the lethality takes place before reproduction?
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The fruit fly Drosophila melanogaster normally feeds on rotting fruit, which may ferment and contain high levels of alcohol. Douglas Cavener and Michael Clegg studied allelic frequencies at the locus for alcohol dehydrogenase (Adh) in experimental populations of D. melanogaster (D. R. Cavener and M. T. Clegg. 1981. Evolution 35:1–10). The experimental populations were established from wild-caught flies and were raised in cages in the laboratory. Two control populations (C1 and C2) were raised on a standard cornmeal-molasses-agar diet. Two ethanol populations (E1 and E2) were raised on a cornmeal-molasses-agar diet to which was added 10% ethanol. The four populations were periodically sampled to determine the allelic frequencies of two alleles at the alcohol dehydrogenase locus, AdhS and AdhF. The frequencies of these alleles in the experimental populations are shown in the graph.
Genotype | Relative viability |
---|---|
AdhF/AdhF | 0.932 |
AdhF/AdhS | 1.288 |
AdhS/AdhS | 0.596 |
A certain form of congenital glaucoma is caused by an autosomal recessive allele. Assume that the mutation rate is 10−5 and that persons having this condition produce, on the average, only about 80% of the offspring produced by persons who do not have glaucoma.
Examine Figure 25.15. Which evolutionary forces: