Introduction

Chapter 1. Chapter 2: Chemistry and Molecules of Life

Interactive Study Guide
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Polaris Trail

Welcome to the Interactive Study Guide for Chapter 2: Chemistry and Molecules of Life! This Study Guide will help you master your understanding of the chapter's Driving Questions, using interactive Infographics and activities, as well as targeted assessment questions. Click "Next" to get started, or select a Driving Question from the drop-down menu to the right.

Mission to Mars:

Prospecting for life on the red planet

DRIVING QUESTIONS

  • How is matter organized into molecules of living organisms?
  • What is the definition of life, and how could Martian life be recognized?
  • What is the basic structural unit of life?
  • Why is water so important for life and living organisms?

Driving Question 1

How is matter organized into molecules of living organisms?

Why should you care?

We literally are what we eat—matter can not be created or destroyed, so every atom of every element in us was once part of some other living organism or the atmosphere or the earth. The atoms of most elements never change because the particles in them do not change. There’s a good chance that right now you may be breathing an oxygen molecule that was once breathed by Julius Caesar. You could have carbon atoms in you that were once part of a Tyrannosaurus.

What should you know?

To fully answer this Driving Question, you should be able to:

  1. Understand where the subatomic particles in an atom are and what their characteristics are.
  2. Explain why carbon is an essential chemical component of living organisms.
  3. Determine whether a molecule is organic or inorganic.
  4. Differentiate between the four classes of molecules of life and when pertinent, the subunits that comprise them.

Infographic Focus

The infographics most pertinent to the Driving Question are 2.3, 2.4, and Up Close: Molecules of Life.

Test Your Vocabulary

Choose the correct term for each of the following definitions:

Term Definition
(A molecule having a carbon-based backbone and at least one carbon-hydrogen bond.
A positively charged subatomic particle in the nucleus of an atom.
Organic molecules made up of linked nucleotide subunits; DNA and RNA are nucleic acids.
Any of various (mostly) organic molecules that can bond with other molecules to form a very large molecule called a polymer.
A chemically pure substance that cannot be chemically broken down; each element is made up of and defined by a single type of atom.
An organic molecule made up of linked amino acid subunits.
An organic molecule made up of one or more sugars. A one-sugar carbohydrate is called a monosaccharide; a carbohydrate with multiple linked sugars is called a polysaccharide.
A molecule made up of individual molecules called monomers, linked together in a chain or cross-linked in two or three dimensions.
The dense core of an atom.
Organic molecules that generally repel water.
Anything that takes up space and has mass.
A group of atoms linked by covalent bonds.
The building block, or monomer, of a nucleic acid.
A strong chemical bond resulting from the sharing of a pair of electrons between two atoms.
The smallest unit of an element that cannot be chemically broken down into smaller parts.
The building block, or monomer, of a carbohydrate.
electrically uncharged subatomic particle in the nucleus of an atom.
(A molecule) lacking a carbon-based backbone and carbon-hydrogen bonds.
The building block, or monomer, of a protein.
A negatively charged subatomic particle with negligible mass; electrons orbit the nucleus.
Large organic molecules that make up living organisms; they include carbohydrates, proteins and nucleic acids.
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Understand where subatomic particles in an atom are and what their characteristics are.

1.

In your notebook, draw an atom (it does not have to be of a particular element), including the subatomic particles.

  • Use different shapes or colors for each kind of particle, so that you can tell them apart.
  • Make sure to put the particles in the proper region of the atom.
  • Add the symbols +, −, or Ø to each particle to indicate which are positively charged, negatively charged, or neutral.

Explain why carbon is an essential chemical component of living organisms.

2.

What makes carbon such an important part of life’s molecules?

Carbon is a very versatile element in that it has four bonding sites with which to bond to other atoms through covalent bonds. Because of this flexibility, carbon forms the backbone of almost every molecule that makes up living things.

Determine whether a molecule is organic or inorganic.

5.

What characterizes organic molecules?

The presence of a carbon based backbone and at least one carbon – hydrogen bond.

Differentiate between the four classes of molecules of life and when pertinent, the subunits that comprise them.

7.

What is the structural difference between carbohydrates, proteins, lipids, and nucleic acids, and what are they made of?

Carbohydrates are made up of repeating subunits of simple sugars that are usually present in ring formation, proteins are made up of subunits of amino acids which are usually present in a linear formation, until the protein is folded into its final 3D shape, Lipids are all hydrophobic but do not have subunits or conform to a general structure and Nucleic Acids are made up of repeating subunits called nucleotides and are usually present in a linear form.

Review Questions

9.

The simplest kind of carbohydrate molecule is called a ____________ . Carbohydrates are important primarily because they can be used to ____________.

A.
B.
C.
D.
E.

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Driving Question 2

What is the definition of life, and how could Martian life be recognized?

Why should you care?

What is life? At first, the question of what is alive and what is not seems so elementary that it should not need asking. But, when it gets down to the details of what defines life, the question starts seeming a lot more profound. This chapter ponders the possibility of extraterrestrial life and how we can recognize and find it. Will it fall under the definition of life as we know it? Here on Earth, it is important to understand the nature of life, because it means understanding who we are and how we and all other life forms work.

What should you know?

To fully answer this Driving Question, you should be able to:

  1. List and describe 5 characteristics inherent to all living things.
  2. Defend an argument about whether a virus is or is not alive and how this may relate to life on Mars.

Infographic Focus

The infographics most pertinent to the Driving Question are 2.1 and 2.10.

Test Your Vocabulary

Choose the correct term for each of the following definitions:

Term Definition
A protein-only infectious agent.
The ability to do work. Living organisms obtain energy either directly from sunlight (through photosynthesis) or from food they consume.
The maintenance of a relatively constant internal environment.
All of the chemical reactions taking place in the cells of a living organism that allow it to obtain and use energy.
An infectious agent made up of a protein shell that encloses genetic information.
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List and describe 5 characteristics inherent to all living things.

12.

What defines life? Refer to Infographic 2.1 in your textbook if necessary.

• Growth

How does the definition of growth differ for unicellular and multicellular organisms?

Unicellular organisms grow by increasing their cell size, while multicellular organisms grow by increasing their number of cells.

Defend an argument about whether a virus is or is not alive, and how this may relate to life on Mars.

27.

A friend asks you about viruses: Specifically she wants to know if they are alive. You explain that viruses consist of genetic material (RNA or DNA) surrounded by a protein coat, which may or may not be enclosed in a small membrane. When a virus infects a cell, the genetic material in the virus 'overwrites' the cell's genetic instructions, and the cell produces more of the components of the virus and assembles the components for it. Then, you realize you have to explain to your friend the characteristics of living organisms and whether or not a virus fits those characteristics:

Does a virus grow?

A virus does not typically grow in size.

Review Questions

34.

Which of the following is not a characteristic of all living things?

A.
B.
C.
D.
E.

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Driving Question 3

What is the basic structural unit of life?

Why should you care?

All life on earth is made of cells, and all cells have cell membranes to hold in their contents. Cell membranes serve as boundaries, gatekeepers, and communicators. You wouldn’t be able to think, move, or generally function without proper cell membranes.

What should you know?

To fully answer this Driving Question, you should be able to:

  1. Describe the basic structural unit of life.
  2. Identify the different parts of the cell membrane.
  3. Explain the importance of the cell membrane.

Infographic Focus

The infographics most pertinent to the Driving Question are 2.5 and 2.10.

Test Your Vocabulary

Choose the correct term for each of the following definitions:

Term Definition
A phospholipid bilayer with embedded proteins that forms the boundary of all cells.
The basic structural unit of living organisms.
“Water-loving”, hydrophilic molecules dissolve in water.
Water-fearing”, hydrophobic molecules will not dissolve in water.
A type of lipid that forms the cell membrane.
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Describe the basic structural unit of life.

36.

In the most basic terms, describe the structure of a single celled organism.

A single celled organism is made up of one cell composed of a water-filled sac surrounded by a membrane.

Identify the parts of the cell membrane.

39.

What are two basic components of the cell membrane?

The basic components of a cellular membrane are phospholipids and proteins.

Explain the importance of the cell membrane.

41.

Why is the cell membrane important?

The cell membrane helps maintain homeostasis by controlling what comes in and what goes out of the cell. It allows the cell to have a different internal environment than the environment the cell is currently in.

Review Questions

42.

The tails of phospholipids are:

A.
B.
C.

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Driving Question 4

Why is water so important for life and living organisms?

Why should you care?

You might rightly say that a sixth characteristic of living things is the presence of water in them. Your body contains around 60% water by weight. All living and actively growing things are made of cells containing mostly water. How did water get to be so important to life? It has several unique characteristics that make it a special molecule.

Because it is a polar molecule (with unevenly distributed charges across it), water is a good solvent for charged or polar substances. Water can break ionic bonds in solutes like salt, so that its component ions are released into the solution as charged particles. The movement of ions in water solution is essential for your brain and muscles to work. Nearly all of the complex chemical interactions that go on every moment of your life—and that enable you to think, live, and breathe—happen in water. The polarity of water molecules is also important in the formation of hydrogen bonds with each other and with other polar biomolecules; this in turn helps keep your DNA together in your cells and your proteins in their proper shapes. Furthermore, you can’t taste or smell organic molecules like sugar or the scent of lemons until they dissolve in water.

What should you know?

To fully answer this Driving Question, you should be able to:

  1. Diagram a water molecule and label its components.
  2. Explain why water is a polar molecule and why this makes it a good solvent for charged or polar substances.
  3. Explain what hydrogen bonding is and its implications for the properties of water.
  4. Explain why water is important for life.

Infographic Focus

The infographics most pertinent to the Driving Question are 2.5, 2.6, 2.7, 2.8 and 2.9.

Test Your Vocabulary

Choose the correct term for each of the following definitions:

Term Definition
A substance that increases the hydrogen ion concentration of solutions, making them more acidic.
A weak electrical attraction between a partially positive hydrogen atom and an atom with a partial negative charge.
A strong electrical attraction between oppositely charged ions formed by the transfer of one or more electrons from one atom to another.
A substance that reduces the hydrogen ion concentration of solutions, making them more alkaline.
(Water) molecules sticking to (water) molecules through hydrogen bonding.
A molecule in which electrons are not shared equally between atoms, causing a partial negative charge at one end and a partial positive charge at the other; for example, water.
A dissolved substance.
A measure of the concentration of hydrogen ions in a solution.
(Water) molecules sticking to other surfaces through hydrogen bonding.
An electrically charged atom, the charge resulting from the loss or gain of electrons.
The mixture of solute and solvent.
A substance in which other substances can dissolve; for example, water.
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Diagram a water molecule and label its components.

45.

In your notebook, draw and label a diagram of a water molecule. Make sure to label where the positive and negative charges are on the molecule.

Explain why water is a polar molecule and why this makes it a good solvent for charged or polar substances.

46.

Are the atoms in water covalently or ionically bonded? How do you know?

They are covalently bonded: the atoms are sharing electrons.

Explain what hydrogen bonding is and what implications it has for the properties of water.

50.

What is hydrogen bonding and how does it affect water bonding with itself and other substances?

Hydrogen bonds are formed when a weak electrical attraction forms between a partially positive hydrogen atom and an atom with a partial negative charge. In the case of water, the partially positively charged hydrogen atoms of the water molecule interact with the negatively charged oxygen molecule of another water molecule. This is cohesion, the way water interacts with itself. When water molecules form hydrogen bonds with another surface, that is adhesion.

Explain why water is important for life.

52.

Based on your answers to the previous questions, why is water important for life?

Water is important for life because it is the solvent in which life happens. Its hydrogen bonding capacity and its polar charge give it unique characteristics that make life possible. Water does this through such things as maintaining aspects of an organism’s homeostasis and allowing all of the chemical reactions in a cell to happen. You are mostly made up of water, and for good reason. Without it, life as we know it would not exist.

Review Questions

53.

Water molecules attracted to each other by hydrogen bonds will be connected by bonds between ____________.

A.
B.
C.
D.
E.

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