Caenorhabditis elegans

Genetic "Vital Statistics"

Genome size:

97 Mb

Chromosomes:

5 autosomes (2n = 10), X chromosome

Number of genes:

19,000

Percentage with human homologs:

25%

Average gene size:

5 kb, 5 exons/gene

Transposons:

Several types, active in some strains

Genome sequenced in:

1998

Caenorhabditis elegans

Key organism for studying:

  • Development

  • Behavior

  • Nerves and muscles

  • Aging

Caenorhabditis elegans may not look like much under a microscope, and, indeed, this 1-mm-long soil-dwelling roundworm (a nematode) is relatively simple as animals go. But that simplicity is part of what makes C. elegans a good model organism. Its small size, rapid growth, ability to self, transparency, and low number of body cells have made it an ideal choice for the study of the genetics of eukaryotic development.

Photomicrograph and drawing of an adult Caenorhabditis elegans.
[From J. E. Sulston and H. R. Horvitz, Developmental Biology, 56, 1977, 111.]

Special features

Geneticists can see right through C. elegans. Unlike other multicellular model organisms, such as fruit flies or Arabidopsis, this tiny worm is transparent, making it efficient to screen large populations for interesting mutations affecting virtually any aspect of anatomy or behavior. Transparency also lends itself well to studies of development: researchers can directly observe all stages of development simply by watching the worms under a light microscope. The results of such studies have shown that C. elegants development is tightly programmed and that each worm has a surprisingly small and consistent number of cells (959 in hermaphrodites and 1031 in males). In fact, biologists have tracked the fates of specific cells as the worm develops and have determined the exact pattern of cell division leading to each adult organ. This effort has yielded a lineage pedigree for every adult cell.

A symbolic representation of the lineages of 11 cells. A cell that undergoes programmed cell death is indicated by a blue X at the end of a branch of a lineage.

Life Cycle

C. elegans is unique among the major model animals in that one of the two sexes is hermaphrodite (XX). The other is male (XO). The two sexes can be distinguished by the greater size of the hermaphrodites and by differences in their sex organs. Hermaphrodites produce both eggs and sperm, and so they can be selfed. The progeny of a selfed hermaphrodite also are hermaphrodites, except when a rare nondisjunction leads to an XO male. If hermaphrodites and males are mixed, the sexes copulate, and many of the resulting zygotes will have been fertilized by the males’ amoeboid sperm. Fertilization and embryo production take place within the hermaphrodite, which then lays the eggs. The eggs finish their development externally.

Total length of life cycle: days

Genetic analysis

Because the worms are small and reproduce quickly and prolifically (selfing produces about 300 progeny and crossing yields about 1000), they produce large populations of progeny that can be screened for rare genetic events. Moreover, because hermaphroditism in C. elegans makes selfing possible, individual worms with homozygous recessive mutations can be recovered quickly by selfing the progeny of treated individual worms. In contrast, other animal models, such as fruit flies or mice, require matings between siblings and take more generations to recover recessive mutations.

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Techniques of Genetic Modification

Standard mutagenesis:

Chemical (EMS) and radiation

Random germ-line mutations

Transposons

Random germ-line insertions

Transgenesis:

Transgene injection of gonad

Unintegrated transgene array; occasional integration

Targeted gene knockouts:

Transposon-mediated mutagenesis

Knockouts selected with PCR

RNAi

Mimics targeted knockout

Laser ablation

Knockout of one cell

Genetic engineering

Transgenesis. The introduction of transgenes into the germ line is made possible by a special property of C. elegans gonads. The gonads of the worm are syncitial, meaning that there are many nuclei in a common cytoplasm. The nuclei do not become incorporated into cells until meiosis, when formation of the individual egg or sperm begins. Thus, a solution of DNA containing the transgene injected into the gonad of a hermaphrodite exposes more than 100 germ-cell precursor nuclei to the transgene. By chance, a few of these nuclei will incorporate the DNA (see Chapter 10).

Transgenes recombine to form multicopy tandem arrays. In an egg, the arrays do not integrate into a chromosome, but transgenes from the arrays are still expressed. Hence, the gene carried on a wild-type DNA clone can be identified by introducing it into a specific recessive recipient strain (functional complementation). In some but not all cases, the transgenic arrays are passed on to progeny. To increase the chance of inheritance, worms are exposed to ionizing radiation, which can induce the integration of an array into an ectopic chromosomal position, and, in this site, the array is reliably transmitted to progeny.

Targeted knockouts. In strains with active transposons, the transposons themselves become agents of mutation by inserting into random locations in the genome, knocking out the interrupted genes. If we can identify organisms with insertions into a specific gene of interest, we can isolate a targeted gene knockout. Inserts into specific genes can be detected by using PCR if one PCR primer is based on the transposon sequence and another one is based on the sequence of the gene of interest. Alternatively, RNAi can be used to nullify the function of specific genes. As an alternative to mutation, individual cells can be killed by a laser beam to observe the effect on worm function or development (laser ablation).

Creation of C. elegans transgenes. (a) Method of injection. (b) Extrachromosomal and integrated arrays.

Main contributions

C. elegans has become a favorite model organism for the study of various aspects of development because of its small and invariant number of cells. One example is programmed cell death, a crucial aspect of normal development. Some cells are genetically programmed to die in the course of development (a process called apoptosis). The results of studies of C. elegans have contributed a useful general model for apoptosis, which is also known to be a feature of human development.

Another model system is the development of the vulva, the opening to the outside of the reproductive tract. Hermaphrodites with defective vulvas still produce progeny, which in screens are easily visible clustered within the body. The results of studies of hermaphrodites with no vulva or with too many have revealed how cells that start off completely equivalent can become differentiated into different cell types.

Production of the C. elegans vulva. (a) The final differentiated tissue. (b) Method of differentiation. The cells begin completely equivalent. An anchor cell behind the equivalent cells sends a signal to the nearest cells, which become the vulva. The primary vulva cell then sends a lateral signal to its neighbors, preventing them from becoming primary cells, even though they, too, have received the signal from the anchor cell.

Behavior also has been the subject of genetic dissection. C. elegans offers an advantage in that worms with defective behavior can often still live and reproduce. The worm’s nerve and muscle systems have been genetically dissected, allowing behaviors to be linked to specific genes.

Other area of contribution

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